OpenRuna
Sign in

Protenix

TOOL

High-accuracy open-source biomolecular structure prediction model from ByteDance. First fully open-source model to outperform AlphaFold3 across diverse benchmarks with Apache 2.0 licensing for both academic and commercial use

View on GitHub

Overview

Protenix is a free tool on OpenRuna. High-accuracy open-source biomolecular structure prediction model from ByteDance. First fully open-source model to outperform AlphaFold3 across diverse benchmarks with Apache 2.0 l

What this tool does

"Protenix" is a tool you can copy, adapt, and run with any modern AI assistant. High-accuracy open-source biomolecular structure prediction model from ByteDance. First fully open-source model to outperform AlphaFold3 across diverse benchmarks with Apache 2.0 licensing for both academic and commercial use It is catalogued next to similar resources on OpenRuna, so the rest of the toolkit you need is close by. Copy it into your assistant of choice and sharpen the result with a couple of follow-up turns.

Use cases

  • Keep it in a shared library as the canonical version of this tool for your organisation.
  • Fork it as a baseline and layer in your own project context, constraints, and examples.
  • Hand "Protenix" to a new teammate so their tool output matches your team's quality bar from day one.
  • Use "Protenix" when you need a repeatable tool for professional work without rewriting instructions every time.

Example output

Ask the model to apply "Protenix" to your scenario and it returns a structured answer — clear sections, actionable steps, and assumptions stated upfront — ready to paste into docs, tickets, or code comments. Expect 2–3 iterations to dial in tone and depth for your context.

Tips by platform

Claude

Claude works best when you paste this tool up front and ask it to outline its plan before writing. Use the artifact panel to refine structured output turn by turn.

ChatGPT

For ChatGPT, save this tool as a Custom Instruction or a saved prompt so it is one click away. Add your specifics in a follow-up rather than editing the original.

Cursor

Cursor users can store this tool as a project rule so Agent mode applies it automatically. Mention it with @ when you want it scoped to a single task.

Frequently asked questions

What is "Protenix"?
It is a tool listed on OpenRuna — High-accuracy open-source biomolecular structure prediction model from ByteDance. First fully open-source model to outperform AlphaFold3 across diverse benchmarks with Apache 2.0 licensing for both academic and commercial use You can copy and adapt it for ChatGPT, Claude, Cursor, or any other AI assistant.
Is "Protenix" free to use?
Most OpenRuna resources are open or CC0-licensed. Check the license shown on this page before commercial use; premium collections are clearly marked as such.
How do I get the best results from this tool?
Replace any placeholders, add your project context, and ask the model to confirm its assumptions first. Iterate over 2–3 follow-up turns rather than expecting a perfect first response.
Does "Protenix" work with both Claude and ChatGPT?
Yes — it is model-agnostic text, so it runs on Claude, ChatGPT, Gemini, and Cursor. The tips on this page cover each of those assistants specifically.
Where can I find resources related to "Protenix"?
Scroll to the Related resources section on this page, or open the matching category hub on OpenRuna to find connected prompts, tools, agents, and datasets in the same topic area.

Related resources